BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008F11SP1|AL425908
(751 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1334 1483 0.0
>3x_Contig1334
Length = 7302
Score = 1483 bits (747), Expect = 0.0
Identities = 748/749 (99%)
Strand = Plus / Plus
Query: 1 atcattcccttcgataccttctttttcaaagtgtttaccgatccagtgccttttaatttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 909 atcattcccttcgataccttctttttcaaagtgtttaccgatccagtgccttttaatttg 968
Query: 61 agcttcccaaccactctgcataacagagtttttggcaagttcacacatatcaacgttgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 969 agcttcccaaccactctgcataacagagtttttggcaagttcacacatatcaacgttgga 1028
Query: 121 caatttgtatatttgtgcagcaacagaatactcttcaattaaaggttctctagtgtaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1029 caatttgtatatttgtgcagcaacagaatactcttcaattaaaggttctctagtgtaaga 1088
Query: 181 aaattgcaatggatcatcagttgaaagcgaaacattgagacctcttttgaaatagtattg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1089 aaattgcaatggatcatcagttgaaagcgaaacattgagacctcttttgaaatagtattg 1148
Query: 241 gaatgggttcttatcgtacgtcaagaacaacgcgttatttgataatggggacatagcaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1149 gaatgggttcttatcgtacgtcaagaacaacgcgttatttgataatggggacatagcaat 1208
Query: 301 cccaatttgatccaaatagaataaatattgtacgaatggaatctttctcaagagtatacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1209 cccaatttgatccaaatagaataaatattgtacgaatggaatctttctcaagagtatacc 1268
Query: 361 atgattaattccttgagctaacaagtaagctgaaattaaatgttcaggatctcctgcctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1269 atgattaattccttgagctaacaagtaagctgaaattaaatgttcaggatctcctgcctc 1328
Query: 421 accacaatgtggtcttaagactaacgtattgaraccacgctttgctctccaccagttcaa 480
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1329 accacaatgtggtcttaagactaacgtattgaaaccacgctttgctctccaccagttcaa 1388
Query: 481 agatgcaatgttcgcgtacaagtagtatagttggtacgaatatggtggattttgagttga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1389 agatgcaatgttcgcgtacaagtagtatagttggtacgaatatggtggattttgagttga 1448
Query: 541 atcccaaagagttggttttggatattttttctggaagcgcctatccactttagattcatc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1449 atcccaaagagttggttttggatattttttctggaagcgcctatccactttagattcatc 1508
Query: 601 atcaacactatcaaaacctacaacgcgttgtaggaaaatgtgtagcttagggtgggattg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1509 atcaacactatcaaaacctacaacgcgttgtaggaaaatgtgtagcttagggtgggattg 1568
Query: 661 tggattttgtgttacctcaaataatggcaaaaaaatgcttttacagatatcaaaaaagtt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1569 tggattttgtgttacctcaaataatggcaaaaaaatgcttttacagatatcaaaaaagtt 1628
Query: 721 ctcgacaattcccgttttcttataaacat 749
|||||||||||||||||||||||||||||
Sbjct: 1629 ctcgacaattcccgttttcttataaacat 1657
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6111
Number of Sequences: 1807
Number of extensions: 6111
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 751
length of database: 10,358,551
effective HSP length: 16
effective length of query: 735
effective length of database: 10,329,639
effective search space: 7592284665
effective search space used: 7592284665
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)